BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B01SP1|AL424900
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1583 1655 0.0
>3x_Contig1583
Length = 12509
Score = 1655 bits (825), Expect = 0.0
Identities = 857/877 (97%)
Strand = Plus / Plus
Query: 1 taggtctatcaactatgtgagtttatgtwcgtctatgagtcttttctttggattcattct 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 683 taggtctatcaactatgtgagtttatgtacgtctatgagtcttttctttggattcattct 742
Query: 61 ttctcttttgghgtttccttctttcaccaaaaccttctttatccatggccatgagacttt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttctcttttggagtttccttctttcaccaaaaccttctttatccatggccatgagacttt 802
Query: 121 ctctttttgctgctgtyaccttagttaacgacttcctaatcacggctgtctcacctacat 180
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 803 ctctttttgctgctgtaaccttagttaacgacttcctaatcacggctgtatcacctacat 862
Query: 181 cggtgaactcttccatctttttattaatcctttcctcaattgcctctactctttgaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 cggtgaactcttccatctttttattaatcctttcctcaattgcctctactctttgaatat 922
Query: 241 ccttttctgttacaamacatagtgattcaccatggcgtccggcacgcgctgtacgaccag 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ccttttctgttacaaaacatagtgattcaccatggcgtccggcacgcgctgtacgaccag 982
Query: 301 ctctatgaatgayagthtctgggttgccaggmatatcatagtttacmacaagttcaacaa 360
|||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 983 ctctatgaatgaaagtatctgggttgccaggaatatcatagtttacaacaagttcaacaa 1042
Query: 361 tagggatatccaaacctctagaagcgacatcagtmgcgataagamctctcgcagcttgtg 420
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 1043 tagggatatccaaacctctagaagcgacatcagtagcgataagaactctcgcagcttgtg 1102
Query: 421 ccctgamtctttgtacagagttcgttctttcttgttgtggcatttgactatgaagtgacg 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 ccctgaatctttgtacagagttcgttctttcttgttgtggcatttgactatgaagtgacg 1162
Query: 481 tgactcttacatctmamgatttcmcagttcttcttaagatttcagccgttacggtacgat 540
|||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1163 tgactcttacatctaaagatttcaaagttcttcttaagatttcagccgttacggtacgat 1222
Query: 541 taacgaaaatcatgccacttgatttgacgtatttctcactggtcaatatctggtataagt 600
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 taacgaaaataatgcaacttgatttgacgtatttctcactggtcaatatctggtataagt 1282
Query: 601 atgactctttaacgtgctctgggactagcaaatatgtcgtctctaatgtcttcggaatgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 atgactctttaacgtgctctgggactagcaaatatgtcgtctctaatgtcttcggaatgg 1342
Query: 661 cgacgttatcaacagactcaacctcaaaagtaaacacaggaggtttgccctccgtctgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 cgacgttatcaacagactcaacctcaaaagtaaacacaggaggtttgccctccgtctgtg 1402
Query: 721 gagcgtctgataaagctttcacttggtctgtcatagtagcagtgaaaaggagattctgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 gagcgtctgataaagctttcacttggtctgtcatagtagcagtgaaaaggagattctgtc 1462
Query: 781 ttttgtttttcggtggtaaaatacytacacatgtagcaaggtccttactgaacgtttccg 840
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1463 ttttgtttttcggtggtaaaatacttacacatgtagcaaggtccttactgaacgtttccg 1522
Query: 841 tcaataatatatcsgcttcatctagtaccagaaattt 877
||||||||||||| |||||||||||||||||||||||
Sbjct: 1523 tcaataatatatcggcttcatctagtaccagaaattt 1559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5326
Number of Sequences: 1807
Number of extensions: 5326
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)